Model info
Transcription factorNfya
ModelNFYA_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusbbRRCCAATSRvMR
Best auROC (human)0.9820596491983105
Best auROC (mouse)0.9600517530107797
Peak sets in benchmark (human)19
Peak sets in benchmark (mouse)14
Aligned words500
TF familyHeteromeric CCAAT-binding factors{4.2.1}
TF subfamilyNF-YA (CP1A, CBF-B){4.2.1.0.1}
MGI97316
EntrezGene18044
UniProt IDNFYA_MOUSE
UniProt ACP23708
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.18291
0.0005 5.32961
0.0001 7.71171
GTEx tissue expression atlas Nfya expression
Motifs in JASPAR
PCM
ACGT
0161.0162.0105.0172.0
0245.0205.061.0189.0
03252.050.0176.022.0
04188.07.0245.060.0
053.0495.00.02.0
062.0493.01.04.0
07500.00.00.00.0
08484.06.09.01.0
092.010.02.0486.0
1072.0277.0129.022.0
11337.026.0131.06.0
12117.089.0261.033.0
13290.0106.070.034.0
14230.015.0198.057.0
PWM
ACGT
01-0.7050.256-0.1720.316
02-1.00.49-0.7050.409
030.695-0.8980.339-1.681
040.404-2.6940.667-0.721
05-3.3251.367-4.4-3.573
06-3.5731.363-3.903-3.126
071.377-4.4-4.4-4.4
081.345-2.819-2.484-3.903
09-3.573-2.394-3.5731.349
10-0.5430.7890.031-1.681
110.984-1.5250.046-2.819
12-0.065-0.3350.73-1.298
130.835-0.163-0.57-1.27
140.604-2.0340.455-0.771