Model info
Transcription factorNfya
ModelNFYA_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusbbRRCCAATSRvMR
Best auROC (human)0.9820596491983105
Best auROC (mouse)0.9600517530107797
Peak sets in benchmark (human)19
Peak sets in benchmark (mouse)14
Aligned words500
TF familyHeteromeric CCAAT-binding factors{4.2.1}
TF subfamilyNF-YA (CP1A, CBF-B){4.2.1.0.1}
MGI97316
EntrezGene18044
UniProt IDNFYA_MOUSE
UniProt ACP23708
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.18291
0.0005 5.32961
0.0001 7.71171
GTEx tissue expression atlas Nfya expression
ReMap ChIP-seq dataset list Nfya datasets
Motifs in JASPAR
PCM
ACGT
0161.0162.0105.0172.0
0245.0205.061.0189.0
03252.050.0176.022.0
04188.07.0245.060.0
053.0495.00.02.0
062.0493.01.04.0
07500.00.00.00.0
08484.06.09.01.0
092.010.02.0486.0
1072.0277.0129.022.0
11337.026.0131.06.0
12117.089.0261.033.0
13290.0106.070.034.0
14230.015.0198.057.0
PWM
ACGT
01-0.7050.256-0.1720.316
02-1.00.49-0.7050.409
030.695-0.8980.339-1.681
040.404-2.6940.667-0.721
05-3.3251.367-4.4-3.573
06-3.5731.363-3.903-3.126
071.377-4.4-4.4-4.4
081.345-2.819-2.484-3.903
09-3.573-2.394-3.5731.349
10-0.5430.7890.031-1.681
110.984-1.5250.046-2.819
12-0.065-0.3350.73-1.298
130.835-0.163-0.57-1.27
140.604-2.0340.455-0.771