Model info
Transcription factorNeurog2
ModelNGN2_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
0
ConsensusvbRRCAGATGKb
Best auROC (human)
Best auROC (mouse)0.9766040197220972
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)4
Aligned words206
TF familyTal-related factors{1.2.3}
TF subfamilyNeurogenin / Atonal-like factors{1.2.3.4}
MGI109619
EntrezGene11924
UniProt IDNGN2_MOUSE
UniProt ACP70447
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.29201
0.0005 5.34384
0.0001 7.60853
GTEx tissue expression atlas Neurog2 expression
Motifs in JASPAR
PCM
ACGT
0155.036.091.024.0
0224.053.082.047.0
03119.018.059.010.0
0489.027.090.00.0
051.0202.01.02.0
06206.00.00.00.0
070.00.0200.06.0
08159.046.01.00.0
092.00.01.0203.0
101.01.0197.07.0
118.021.0150.027.0
1215.084.045.062.0
PWM
ACGT
010.064-0.3470.558-0.735
02-0.7350.0280.456-0.089
030.823-1.0050.133-1.539
040.536-0.6230.547-3.68
05-3.121.348-3.12-2.764
061.367-3.68-3.68-3.68
07-3.68-3.681.338-1.975
081.11-0.11-3.12-3.68
09-2.764-3.68-3.121.353
10-3.12-3.121.323-1.847
11-1.734-0.8611.052-0.623
12-1.1740.479-0.1310.181