Model info
Transcription factorNKX2-1
ModelNKX21_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusbWKGAGWGbh
Best auROC (human)0.9203111817946897
Best auROC (mouse)0.9168966170370096
Peak sets in benchmark (human)14
Peak sets in benchmark (mouse)9
Aligned words501
TF familyNK-related factors{3.1.2}
TF subfamilyNK-2.1{3.1.2.14}
HGNC11825
EntrezGene7080
UniProt IDNKX21_HUMAN
UniProt ACP43699
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.27247
0.0005 6.21355
0.0001 7.83281
GTEx tissue expression atlas NKX2-1 expression
ReMap ChIP-seq dataset list NKX2-1 datasets
Motifs in JASPAR
PCM
ACGT
0133.0211.0113.0143.0
0266.046.012.0376.0
0338.011.0167.0284.0
0417.03.0479.01.0
05498.01.00.01.0
065.04.0491.00.0
07141.01.052.0306.0
0854.01.0439.06.0
0916.0163.0222.099.0
1079.0174.078.0169.0
PWM
ACGT
01-1.2980.519-0.10.133
02-0.628-0.979-2.2341.093
03-1.163-2.3110.2870.814
04-1.92-3.3251.334-3.903
051.373-3.903-4.4-3.903
06-2.961-3.1261.359-4.4
070.119-3.903-0.860.888
08-0.823-3.9031.247-2.819
09-1.9750.2630.569-0.23
10-0.4520.327-0.4640.298