Model info
Transcription factorNKX6-1
ModelNKX61_HUMAN.H11MO.1.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length7
Quality
B
Motif rank
1
ConsensushAATGRv
Best auROC (human)0.5474302274487713
Best auROC (mouse)0.8463554561915254
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)8
Aligned words500
TF familyNK-related factors{3.1.2}
TF subfamilyNK-6{3.1.2.19}
HGNC7839
EntrezGene4825
UniProt IDNKX61_HUMAN
UniProt ACP78426
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.56757
0.0005 6.831025
0.0001 7.089180000000001
GTEx tissue expression atlas NKX6-1 expression
ReMap ChIP-seq dataset list NKX6-1 datasets
Motifs in JASPAR
PCM
ACGT
01189.066.036.0209.0
02460.03.037.00.0
03497.01.02.00.0
040.00.03.0497.0
050.00.0500.00.0
06279.01.0218.02.0
07199.0138.0135.028.0
PWM
ACGT
010.409-0.628-1.2150.509
021.294-3.325-1.189-4.4
031.371-3.903-3.573-4.4
04-4.4-4.4-3.3251.371
05-4.4-4.41.377-4.4
060.796-3.9030.551-3.573
070.460.0980.076-1.454