Model info
Transcription factorNR2E1
ModelNR2E1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusMARKCAAdAAGTCAWbh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words70
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyTailless-like receptors (NR2E){2.1.3.3}
HGNC7973
EntrezGene7101
UniProt IDNR2E1_HUMAN
UniProt ACQ9Y466
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.235609999999999
0.0005 5.34126
0.0001 7.68186
GTEx tissue expression atlas NR2E1 expression
ReMap ChIP-seq dataset list NR2E1 datasets
Motifs in JASPAR
PCM
ACGT
0143.3528.2467.342.962
0249.0953.515.6983.598
038.7941.32146.7295.057
043.7583.7585.94748.437
050.7354.4282.2774.466
0653.613.0073.0072.277
0749.3223.7363.6485.195
0825.1595.8369.57321.334
0961.9010.00.00.0
1058.1653.0070.730.0
110.00.061.9010.0
122.2772.1890.057.435
130.058.1652.2771.459
1460.1930.5690.5690.569
1536.4888.4126.31210.689
1610.2811.73913.37526.507
1712.73914.119.9125.141
PWM
ACGT
010.989-0.576-0.679-1.419
021.111-1.291-0.897-1.271
03-0.519-1.9481.062-0.997
04-1.237-1.237-0.8611.098
05-2.2381.212-1.607-1.1
061.197-1.408-1.408-1.607
071.115-1.242-1.261-0.975
080.462-0.877-0.4430.304
091.338-2.773-2.773-2.773
101.277-1.408-2.238-2.773
11-2.773-2.7731.338-2.773
12-1.607-1.634-2.7731.265
13-2.7731.277-1.607-1.891
141.311-2.333-2.333-2.333
150.821-0.558-0.81-0.342
16-0.378-0.257-0.1360.512
17-0.181-0.086-0.4110.461