Model info
Transcription factorNr4a1
ModelNR4A1_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
B
Motif rank
0
ConsensusdRARdGbMA
Best auROC (human)0.9030505035988935
Best auROC (mouse)0.6311689301112023
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)2
Aligned words499
TF familyNGFI-B-related receptors (NR4){2.1.4}
TF subfamilyNGFI-B (Nur77, NR4A1){2.1.4.0.1}
MGI1352454
EntrezGene15370
UniProt IDNR4A1_MOUSE
UniProt ACP12813
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.755885
0.0005 6.409355
0.0001 7.3884
GTEx tissue expression atlas Nr4a1 expression
Motifs in JASPAR
PCM
ACGT
01206.074.0134.085.0
02311.022.0146.020.0
03379.012.0103.05.0
04361.059.072.07.0
05169.011.0184.0135.0
0637.07.0436.019.0
0726.069.0190.0214.0
0892.0368.033.06.0
09475.02.04.018.0
PWM
ACGT
010.497-0.5140.071-0.378
020.906-1.6790.156-1.768
031.103-2.232-0.189-2.959
041.054-0.735-0.541-2.692
050.3-2.3090.3850.078
06-1.187-2.6921.243-1.816
07-1.523-0.5820.4160.535
08-0.31.074-1.296-2.817
091.328-3.571-3.124-1.866