Model info
Transcription factorOLIG3
ModelOLIG3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusRMCATATGKTn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words3197
TF familyTal-related factors{1.2.3}
TF subfamilyNeurogenin / Atonal-like factors{1.2.3.4}
HGNC18003
EntrezGene167826
UniProt IDOLIG3_HUMAN
UniProt ACQ7RTU3
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.215325
0.0005 4.437035
0.0001 7.129405
GTEx tissue expression atlas OLIG3 expression
ReMap ChIP-seq dataset list OLIG3 datasets
Motifs in JASPAR
PCM
ACGT
011846.5149.5840.5239.5
02376.252404.25260.2535.25
03566.252492.259.258.25
043010.258.2547.2510.25
053.01.043.03029.0
063030.031.012.03.0
0714.045.04.03013.0
083.255.253046.2521.25
0918.5400.5917.51739.5
1036.5284.569.52685.5
11559.0736.0647.01134.0
PWM
ACGT
010.874-1.6270.089-1.161
02-0.7121.138-1.078-3.03
03-0.3051.174-4.227-4.32
041.363-4.32-2.751-4.142
05-5.037-5.546-2.8411.369
061.369-3.151-4.008-5.037
07-3.875-2.797-4.8551.364
08-4.988-4.6661.375-3.501
09-3.627-0.650.1760.815
10-2.997-0.99-2.3781.249
11-0.318-0.044-0.1720.388