Model info
Transcription factorOVOL1
ModelOVOL1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length9
Quality
C
Motif rank
0
ConsensusKGTAACKGT
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyOVOL-factors{2.3.3.17}
HGNC8525
EntrezGene5017
UniProt IDOVOL1_HUMAN
UniProt ACO14753
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.81548
0.0005 5.44968
0.0001 6.488714999999999
GTEx tissue expression atlas OVOL1 expression
ReMap ChIP-seq dataset list OVOL1 datasets
Motifs in JASPAR
PCM
ACGT
010.01.02.04.0
021.00.06.00.0
030.00.01.06.0
047.00.00.00.0
056.01.00.00.0
061.06.00.00.0
071.00.02.04.0
081.00.06.00.0
092.00.00.05.0
PWM
ACGT
01-1.525-0.4080.1060.696
02-0.408-1.5251.065-1.525
03-1.525-1.525-0.4081.065
041.208-1.525-1.525-1.525
051.065-0.408-1.525-1.525
06-0.4081.065-1.525-1.525
07-0.408-1.5250.1060.696
08-0.408-1.5251.065-1.525
090.106-1.525-1.5250.897