Model info
Transcription factorPATZ1
ModelPATZ1_HUMAN.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
C
Motif rank
1
ConsensusdGGGAGRRG
Best auROC (human)0.858847083106883
Best auROC (mouse)
Peak sets in benchmark (human)6
Peak sets in benchmark (mouse)
Aligned words499
TF familyFactors with multiple dispersed zinc fingers{2.3.4}
TF subfamilyMAZ-like factors{2.3.4.8}
HGNC13071
EntrezGene23598
UniProt IDPATZ1_HUMAN
UniProt ACQ9HBE1
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.07992
0.0005 5.99516
0.0001 7.54721
GTEx tissue expression atlas PATZ1 expression
ReMap ChIP-seq dataset list PATZ1 datasets
Motifs in JASPAR
PCM
ACGT
01253.062.0114.067.0
0229.06.0406.055.0
0311.08.0461.016.0
0412.014.0467.03.0
05481.04.00.011.0
06111.01.0374.010.0
0797.02.0350.047.0
08137.09.0312.038.0
0965.012.0402.017.0
PWM
ACGT
010.707-0.681-0.083-0.605
02-1.413-2.8111.177-0.798
03-2.303-2.5761.304-1.968
04-2.226-2.0891.317-3.317
051.346-3.119-4.393-2.303
06-0.109-3.8961.096-2.386
07-0.242-3.5651.03-0.95
080.099-2.4760.915-1.155
09-0.635-2.2261.168-1.912