Model info
Transcription factorPAX4
ModelPAX4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensushdhhTAATKMdh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words934
TF familyPaired plus homeo domain{3.2.1}
TF subfamilyPAX-4/6{3.2.1.2}
HGNC8618
EntrezGene5078
UniProt IDPAX4_HUMAN
UniProt ACO43316
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.779275
0.0005 6.483689999999999
0.0001 7.78688
GTEx tissue expression atlas PAX4 expression
ReMap ChIP-seq dataset list PAX4 datasets
Motifs in JASPAR
PCM
ACGT
01196.702107.099.561531.064
02401.611118.16168.007246.548
03482.12176.882124.803150.522
04198.458415.16179.632241.076
050.08.9280.0925.399
06790.52620.0882.976120.737
07870.1335.2080.058.986
080.035.9231.488896.916
0959.89136.827167.024670.585
10403.553412.48161.75156.543
11357.879.659414.76582.103
12238.762365.1381.891248.543
PWM
ACGT
01-0.17-0.772-0.8430.817
020.539-0.674-0.3270.054
030.721-0.276-0.62-0.435
04-0.1620.572-1.0620.031
05-4.924-3.096-4.9241.371
061.214-2.379-3.916-0.653
071.31-3.527-4.924-1.355
08-4.924-1.833-4.2981.34
09-1.34-1.809-0.3331.05
100.5440.566-1.31-1.396
110.424-1.0620.571-1.032
120.0220.444-1.0350.062