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Model info
Transcription factorPax5
ModelPAX5_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusnddbYvvvvRRSCRKGRMbn
Best auROC (human)0.947
Best auROC (mouse)0.927
Peak sets in benchmark (human)32
Peak sets in benchmark (mouse)8
Aligned words401
TF familyPaired domain only {3.2.2}
TF subfamilyPAX-2-like factors (partial homeobox) {3.2.2.2}
MGIMGI:97489
EntrezGeneGeneID:18507
(SSTAR profile)
UniProt IDPAX5_MOUSE
UniProt ACQ02650
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.561260000000001
0.0005 8.297260000000001
0.0001 11.92416
GTEx tissue expression atlas Pax5 expression
Motifs in JASPAR
MA0014.1 (Pax5; Mus musculus)
MA0014.2 (PAX5; Homo sapiens)
MA0014.3 (PAX5; Homo sapiens)
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0155.03.037.013.024.02.022.011.038.014.068.021.05.03.068.08.0
0248.019.044.011.07.04.05.06.042.033.076.044.07.01.041.04.0
0315.032.041.016.02.018.09.028.017.039.074.036.00.010.043.012.0
043.014.08.09.02.057.010.030.06.0110.021.030.03.067.012.010.0
055.03.03.03.0181.032.024.011.01.044.03.03.015.041.014.09.0
0627.026.0132.017.099.07.013.01.05.017.016.06.017.07.02.00.0
0723.038.078.09.014.031.09.03.03.0112.040.08.00.07.017.00.0
083.011.023.03.019.0114.045.010.022.070.038.014.00.08.011.01.0
0910.04.029.01.0134.022.038.09.033.011.070.03.08.02.018.00.0
1098.08.039.040.029.02.02.06.093.06.040.016.06.01.01.05.0
110.0104.0121.01.00.011.06.00.01.019.061.01.00.021.046.00.0
120.00.00.01.00.0138.00.017.00.0184.06.044.00.00.00.02.0
130.00.00.00.082.05.0226.09.02.00.04.00.05.00.059.00.0
147.02.012.068.00.01.00.04.010.016.056.0207.00.01.01.07.0
153.01.013.00.06.00.014.00.063.01.05.00.025.01.0257.03.0
1666.01.023.07.02.00.01.00.0212.021.044.012.01.00.01.01.0
1734.0240.04.03.010.04.01.07.017.041.01.010.02.011.02.05.0
1813.018.020.012.048.0145.049.054.03.03.00.02.03.04.03.015.0
1925.012.024.06.068.032.024.046.012.028.021.011.013.043.017.010.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.8-1.9980.407-0.621-0.02-2.35-0.106-0.7830.434-0.5481.011-0.152-1.532-1.9981.011-1.089
020.665-0.250.579-0.783-1.216-1.738-1.532-1.3620.5330.2941.1220.579-1.216-2.8970.509-1.738
03-0.4810.2640.509-0.418-2.35-0.303-0.9760.132-0.3590.4591.0950.38-4.199-0.8750.556-0.698
04-1.998-0.548-1.089-0.976-2.350.836-0.8750.2-1.3621.49-0.1520.2-1.9980.996-0.698-0.875
05-1.532-1.998-1.998-1.9981.9870.264-0.02-0.783-2.8970.579-1.998-1.998-0.4810.509-0.548-0.976
060.0960.0591.672-0.3591.385-1.216-0.621-2.897-1.532-0.359-0.418-1.362-0.359-1.216-2.35-4.199
07-0.0620.4341.148-0.976-0.5480.232-0.976-1.998-1.9981.5080.484-1.089-4.199-1.216-0.359-4.199
08-1.998-0.783-0.062-1.998-0.251.5260.601-0.875-0.1061.040.434-0.548-4.199-1.089-0.783-2.897
09-0.875-1.7380.166-2.8971.687-0.1060.434-0.9760.294-0.7831.04-1.998-1.089-2.35-0.303-4.199
101.375-1.0890.4590.4840.166-2.35-2.35-1.3621.323-1.3620.484-0.418-1.362-2.897-2.897-1.532
11-4.1991.4341.585-2.897-4.199-0.783-1.362-4.199-2.897-0.250.903-2.897-4.199-0.1520.623-4.199
12-4.199-4.199-4.199-2.897-4.1991.716-4.199-0.359-4.1992.003-1.3620.579-4.199-4.199-4.199-2.35
13-4.199-4.199-4.199-4.1991.197-1.5322.208-0.976-2.35-4.199-1.738-4.199-1.532-4.1990.87-4.199
14-1.216-2.35-0.6981.011-4.199-2.897-4.199-1.738-0.875-0.4180.8182.121-4.199-2.897-2.897-1.216
15-1.998-2.897-0.621-4.199-1.362-4.199-0.548-4.1990.935-2.897-1.532-4.1990.02-2.8972.337-1.998
160.982-2.897-0.062-1.216-2.35-4.199-2.897-4.1992.145-0.1520.579-0.698-2.897-4.199-2.897-2.897
170.3232.268-1.738-1.998-0.875-1.738-2.897-1.216-0.3590.509-2.897-0.875-2.35-0.783-2.35-1.532
18-0.621-0.303-0.2-0.6980.6651.7660.6860.782-1.998-1.998-4.199-2.35-1.998-1.738-1.998-0.481
190.02-0.698-0.02-1.3621.0110.264-0.020.623-0.6980.132-0.152-0.783-0.6210.556-0.359-0.875