Model info
Transcription factorPAX7
ModelPAX7_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusTAATYGATTAd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words17615
TF familyPaired plus homeo domain{3.2.1}
TF subfamilyPAX-3/7{3.2.1.1}
HGNC8621
EntrezGene5081
UniProt IDPAX7_HUMAN
UniProt ACP23759
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.88726
0.0005 3.4116099999999996
0.0001 6.620975
GTEx tissue expression atlas PAX7 expression
ReMap ChIP-seq dataset list PAX7 datasets
Motifs in JASPAR
PCM
ACGT
012308.584459.655487.51211889.531
0215055.20117.57937.49235.01
0314528.99119.28518.044578.962
0437.95742.2746.61215018.443
0599.9426233.808155.3398656.193
06161.98119.29314955.9138.095
0715052.26120.84463.1519.026
0865.40215.0912.57815052.213
0930.94835.94119.1315059.263
1012997.195489.861519.141139.086
114950.4172033.2422229.9645931.659
PWM
ACGT
01-0.494-2.104-2.0461.144
021.38-5.245-4.553-4.618
031.344-5.163-5.222-1.874
04-4.542-4.44-4.3481.377
05-3.6110.498-3.1790.827
06-3.138-5.1631.373-5.888
071.38-5.093-4.057-5.803
08-4.023-5.378-5.5331.38
09-4.733-4.593-5.171.38
101.233-2.041-1.983-1.2
110.268-0.621-0.5290.449