Model info
Transcription factorPax8
ModelPAX8_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
D
Motif rank
0
ConsensusbYvAYYSRvSYRKd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words37
TF familyPaired domain only{3.2.2}
TF subfamilyPAX-2-like factors (partial homeobox){3.2.2.2}
MGI97492
EntrezGene18510
UniProt IDPAX8_MOUSE
UniProt ACQ00288
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.76461
0.0005 5.31631
0.0001 6.42896
GTEx tissue expression atlas Pax8 expression
Motifs in JASPAR
PCM
ACGT
014.2927.82714.67310.128
023.038.2483.53522.107
039.0914.02711.7832.02
0430.7482.5812.021.571
055.0516.6080.015.262
062.5255.8921.57126.933
073.14216.1616.6081.01
0817.172.13214.4763.142
0915.82312.124.9384.04
101.018.30425.0812.525
115.27419.5260.012.12
1214.3644.0418.5160.0
130.03.59116.83316.496
1412.7092.04816.0756.088
PWM
ACGT
01-0.668-0.1490.430.085
02-0.947-0.102-0.8260.82
03-0.0140.3880.225-1.243
041.139-1.068-1.243-1.41
05-0.5320.547-2.4190.467
06-1.084-0.4-1.411.011
07-0.9180.5210.547-1.667
080.579-1.2060.417-0.918
090.5010.251-0.551-0.718
10-1.667-0.0960.942-1.084
11-0.4950.701-2.4190.251
120.41-0.7180.65-2.419
13-2.419-0.8130.560.541
140.295-1.2340.516-0.371