Model info
Transcription factorCbfb
ModelPEBB_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length11
Quality
C
Motif rank
0
ConsensusYbTGTGGTYdb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words23
TF family
TF subfamily
MGI99851
EntrezGene12400
UniProt IDPEBB_MOUSE
UniProt ACQ08024
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.188305
0.0005 5.86479
0.0001 7.308954999999999
GTEx tissue expression atlas Cbfb expression
Motifs in JASPAR
PCM
ACGT
010.3486.0644.11212.476
020.9769.6183.0679.339
030.6970.01.11521.188
040.03.48518.6790.836
050.05.7150.017.285
061.6730.021.3270.0
070.8360.022.1640.0
080.00.05.43617.564
091.2559.7581.11510.873
108.7820.8364.3219.061
111.2557.3887.8066.552
PWM
ACGT
01-1.7530.047-0.2890.708
02-1.3120.465-0.5290.438
03-1.484-2.121-1.2361.213
04-2.121-0.4261.091-1.394
05-2.121-0.005-2.1211.017
06-0.978-2.1211.219-2.121
07-1.394-2.1211.256-2.121
08-2.121-2.121-0.0491.032
09-1.1650.478-1.2360.579
100.381-1.394-0.2470.41
11-1.1650.2240.2740.116