Model info
Transcription factorPITX3
ModelPITX3_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length18
Quality
D
Motif rank
0
ConsensusdddRdWWhvdvGGATTAd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7586
TF familyPaired-related HD factors{3.1.3}
TF subfamilyPITX{3.1.3.19}
HGNC9006
EntrezGene5309
UniProt IDPITX3_HUMAN
UniProt ACO75364
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.014609999999999
0.0005 5.228009999999999
0.0001 7.691510000000001
GTEx tissue expression atlas PITX3 expression
ReMap ChIP-seq dataset list PITX3 datasets
Motifs in JASPAR
PCM
ACGT
011710.01223.03141.01512.0
021487.25870.253935.251293.25
031495.75672.754138.751278.75
041869.25235.254087.251394.25
052208.0257.02977.02144.0
063965.75709.7573.752836.75
071674.0349.0235.05328.0
082018.51004.5527.54035.5
094546.51113.51043.5882.5
103646.25712.251798.251429.25
111647.0906.04158.0875.0
12570.053.06818.0145.0
1359.017.07302.0208.0
146718.0814.012.042.0
150.252.251.257582.25
1634.2563.255.257483.25
177310.259.2521.25245.25
182848.5771.52710.51255.5
PWM
ACGT
01-0.103-0.4380.504-0.226
02-0.243-0.7780.729-0.382
03-0.237-1.0340.78-0.394
04-0.014-2.0790.767-0.307
050.152-1.9910.450.123
060.737-0.981-3.2180.402
07-0.125-1.687-2.081.032
080.062-0.634-1.2770.754
090.874-0.532-0.596-0.764
100.653-0.977-0.053-0.282
11-0.141-0.7370.784-0.772
12-1.199-3.5371.279-2.557
13-3.434-4.5921.347-2.201
141.264-0.844-4.893-3.759
15-6.639-6.049-6.3011.385
16-3.952-3.367-5.5361.372
171.348-5.108-4.393-2.038
180.406-0.8980.357-0.412