Model info
Transcription factorPLAG1
ModelPLAG1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
D
Motif rank
0
ConsensusRGGGGSMhndRdMGGGK
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words25
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyPLAG factors{2.3.3.25}
HGNC9045
EntrezGene5324
UniProt IDPLAG1_HUMAN
UniProt ACQ6DJT9
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.30671
0.0005 5.199059999999999
0.0001 7.047060000000001
GTEx tissue expression atlas PLAG1 expression
ReMap ChIP-seq dataset list PLAG1 datasets
Motifs in JASPAR
PCM
ACGT
015.50.516.52.5
025.00.020.00.0
0310.00.015.00.0
040.00.025.00.0
050.08.017.00.0
061.014.07.03.0
0713.09.02.01.0
085.08.03.09.0
095.08.06.06.0
1011.02.05.07.0
118.06.011.00.0
124.02.012.07.0
1317.04.03.01.0
142.00.020.03.0
151.00.024.00.0
160.00.025.00.0
172.01.017.05.0
PWM
ACGT
01-0.112-1.6880.897-0.758
02-0.195-2.1711.081-2.171
030.426-2.1710.807-2.171
04-2.171-2.1711.297-2.171
05-2.1710.2220.926-2.171
06-1.3630.7410.101-0.617
070.6710.329-0.922-1.363
08-0.1950.222-0.6170.329
09-0.1950.222-0.036-0.036
100.515-0.922-0.1950.101
110.222-0.0360.515-2.171
12-0.384-0.9220.5960.101
130.926-0.384-0.617-1.363
14-0.922-2.1711.081-0.617
15-1.363-2.1711.257-2.171
16-2.171-2.1711.297-2.171
17-0.922-1.3630.926-0.195