Model info
Transcription factorPOU2F1
ModelPO2F1_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusRnKbvhATGSAAWhRh
Best auROC (human)0.7658003841988124
Best auROC (mouse)0.6687920144365399
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)14
Aligned words134
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU2 (Oct-1/2-like factors){3.1.10.2}
HGNC9212
EntrezGene5451
UniProt IDPO2F1_HUMAN
UniProt ACP14859
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.57121
0.0005 6.44341
0.0001 8.21231
GTEx tissue expression atlas POU2F1 expression
ReMap ChIP-seq dataset list POU2F1 datasets
Motifs in JASPAR
PCM
ACGT
0185.015.021.013.0
0258.023.023.030.0
0310.06.040.078.0
0411.049.045.029.0
0540.018.063.013.0
0666.022.05.041.0
07127.05.01.01.0
085.02.01.0126.0
098.00.0126.00.0
102.062.057.013.0
11123.03.04.04.0
12110.05.017.02.0
1372.09.07.046.0
1416.053.08.057.0
1581.019.023.011.0
1662.011.010.051.0
PWM
ACGT
010.91-0.761-0.446-0.892
020.534-0.36-0.36-0.106
03-1.129-1.570.1720.825
04-1.0440.3690.286-0.139
050.172-0.5910.615-0.892
060.661-0.402-1.7190.196
071.306-1.719-2.748-2.748
08-1.719-2.377-2.7481.299
09-1.326-3.3451.299-3.345
10-2.3770.5990.517-0.892
111.275-2.107-1.894-1.894
121.164-1.719-0.645-2.377
130.746-1.223-1.440.307
14-0.7010.446-1.3260.517
150.862-0.541-0.36-1.044
160.599-1.044-1.1290.408