Model info
Transcription factorPou2f1
ModelPO2F1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusRnKbvhATGSAAWhRh
Best auROC (human)0.7658003841988124
Best auROC (mouse)0.6687920144365399
Peak sets in benchmark (human)15
Peak sets in benchmark (mouse)14
Aligned words134
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU2 (Oct-1/2-like factors){3.1.10.2}
MGI101898
EntrezGene18986
UniProt IDPO2F1_MOUSE
UniProt ACP25425
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.4307099999999995
0.0005 6.28926
0.0001 8.052710000000001
GTEx tissue expression atlas Pou2f1 expression
Motifs in JASPAR
PCM
ACGT
0185.015.021.013.0
0258.023.023.030.0
0310.06.040.078.0
0411.049.045.029.0
0540.018.063.013.0
0666.022.05.041.0
07127.05.01.01.0
085.02.01.0126.0
098.00.0126.00.0
102.062.057.013.0
11123.03.04.04.0
12110.05.017.02.0
1372.09.07.046.0
1416.053.08.057.0
1581.019.023.011.0
1662.011.010.051.0
PWM
ACGT
010.91-0.761-0.446-0.892
020.534-0.36-0.36-0.106
03-1.129-1.570.1720.825
04-1.0440.3690.286-0.139
050.172-0.5910.615-0.892
060.661-0.402-1.7190.196
071.306-1.719-2.748-2.748
08-1.719-2.377-2.7481.299
09-1.326-3.3451.299-3.345
10-2.3770.5990.517-0.892
111.275-2.107-1.894-1.894
121.164-1.719-0.645-2.377
130.746-1.223-1.440.307
14-0.7010.446-1.3260.517
150.862-0.541-0.36-1.044
160.599-1.044-1.1290.408