Model info
Transcription factorPOU6F2
ModelPO6F2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusdhTAATTAGbh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1481
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU6 (Brn-5-like factors){3.1.10.6}
HGNC21694
EntrezGene11281
UniProt IDPO6F2_HUMAN
UniProt ACP78424
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.52984
0.0005 5.399675
0.0001 8.31268
GTEx tissue expression atlas POU6F2 expression
ReMap ChIP-seq dataset list POU6F2 datasets
Motifs in JASPAR
PCM
ACGT
01253.544228.631543.228272.159
02412.741225.17196.444463.208
0326.63430.37220.4861220.07
041296.8980.00.6640.0
051293.8240.03.0740.664
060.00.07.7221289.84
073.7380.0469.756824.068
081267.7137.0156.35116.483
0931.28227.9621220.48817.83
1087.073572.96454.053183.477
11236.273282.95166.207612.132
PWM
ACGT
01-0.245-0.3480.513-0.175
020.24-0.363-0.4980.355
03-2.44-2.317-2.6841.321
041.382-5.204-4.889-5.204
051.379-5.204-4.205-4.889
06-5.204-5.204-3.5351.376
07-4.077-5.2040.3690.929
081.359-3.612-3.69-2.882
09-2.289-2.3941.321-2.811
10-1.30.5660.335-0.566
11-0.315-0.136-0.6640.632