Model info
Transcription factorPRDM14
ModelPRD14_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusddSWTAGRGWMShn
Best auROC (human)0.9141522256973487
Best auROC (mouse)0.8890197904009194
Peak sets in benchmark (human)7
Peak sets in benchmark (mouse)11
Aligned words500
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyunclassified{2.3.3.0}
HGNC14001
EntrezGene63978
UniProt IDPRD14_HUMAN
UniProt ACQ9GZV8
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.56371
0.0005 5.47191
0.0001 7.3468100000000005
GTEx tissue expression atlas PRDM14 expression
ReMap ChIP-seq dataset list PRDM14 datasets
Motifs in JASPAR
PCM
ACGT
01235.060.0139.066.0
02199.024.0224.053.0
0337.079.0356.028.0
0486.09.020.0385.0
056.05.05.0484.0
06491.02.03.04.0
0741.030.0428.01.0
08288.05.0184.023.0
0938.032.0419.011.0
10320.067.017.096.0
1184.0369.033.014.0
1219.0374.068.039.0
1357.0203.034.0206.0
14190.079.0131.0100.0
PWM
ACGT
010.626-0.7210.105-0.628
020.46-1.60.578-0.841
03-1.189-0.4521.039-1.454
04-0.368-2.484-1.771.117
05-2.819-2.961-2.9611.345
061.359-3.573-3.325-3.126
07-1.09-1.3891.222-3.903
080.828-2.9610.383-1.64
09-1.163-1.3281.201-2.311
100.932-0.613-1.92-0.26
11-0.3921.074-1.298-2.096
12-1.8181.088-0.599-1.138
13-0.7710.48-1.270.495
140.415-0.4520.046-0.22