Model info
Transcription factorPGR
ModelPRGR_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
1
ConsensusRGvACARvv
Best auROC (human)0.8725506014278844
Best auROC (mouse)0.8535562283476963
Peak sets in benchmark (human)51
Peak sets in benchmark (mouse)15
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
HGNC8910
EntrezGene5241
UniProt IDPRGR_HUMAN
UniProt ACP06401
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.42202
0.0005 6.375655
0.0001 7.783685
GTEx tissue expression atlas PGR expression
ReMap ChIP-seq dataset list PGR datasets
Motifs in JASPAR
PCM
ACGT
01246.00.0227.027.0
0219.00.0481.00.0
03236.066.0148.050.0
04489.01.08.02.0
053.0492.01.04.0
06486.01.09.04.0
0792.030.0369.09.0
08254.083.0109.054.0
09242.0153.069.036.0
PWM
ACGT
010.671-4.40.591-1.489
02-1.818-4.41.338-4.4
030.63-0.6280.167-0.898
041.355-3.903-2.584-3.573
05-3.3251.361-3.903-3.126
061.349-3.903-2.484-3.126
07-0.302-1.3891.074-2.484
080.703-0.403-0.135-0.823
090.6550.2-0.584-1.215