Model info
Transcription factorPgr
ModelPRGR_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length8
Quality
A
Motif rank
1
ConsensusvRGdACAb
Best auROC (human)0.845103837760348
Best auROC (mouse)0.9241851377710262
Peak sets in benchmark (human)51
Peak sets in benchmark (mouse)15
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
MGI97567
EntrezGene
UniProt IDPRGR_MOUSE
UniProt ACQ00175
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.903124999999999
0.0005 6.499475
0.0001 7.18249
GTEx tissue expression atlas Pgr expression
Motifs in JASPAR
PCM
ACGT
01186.0111.0144.059.0
02279.01.0202.018.0
039.01.0486.04.0
04242.049.0153.056.0
05467.011.06.016.0
065.0484.09.02.0
07452.03.05.040.0
0864.097.0214.0125.0
PWM
ACGT
010.393-0.1170.14-0.737
020.796-3.9030.475-1.868
03-2.484-3.9031.349-3.126
040.655-0.9180.2-0.788
051.309-2.311-2.819-1.975
06-2.9611.345-2.484-3.573
071.276-3.325-2.961-1.114
08-0.658-0.250.5330.0