Model info
Transcription factorPROP1
ModelPROP1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
D
Motif rank
0
ConsensusWAATKGvRTTW
Best auROC (human)
Best auROC (mouse)0.9211137704758816
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words500
TF familyPaired-related HD factors{3.1.3}
TF subfamilyPROP{3.1.3.20}
HGNC9455
EntrezGene5626
UniProt IDPROP1_HUMAN
UniProt ACO75360
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.584199999999999
0.0005 6.496015
0.0001 8.41371
GTEx tissue expression atlas PROP1 expression
ReMap ChIP-seq dataset list PROP1 datasets
Motifs in JASPAR
PCM
ACGT
0188.022.013.0377.0
02455.03.023.019.0
03500.00.00.00.0
0415.034.023.0428.0
0538.055.086.0321.0
06239.00.0261.00.0
07245.068.0149.038.0
08376.09.074.041.0
096.02.03.0489.0
1021.047.02.0430.0
11362.027.021.090.0
PWM
ACGT
01-0.346-1.681-2.1631.096
021.283-3.325-1.64-1.818
031.377-4.4-4.4-4.4
04-2.034-1.27-1.641.222
05-1.163-0.805-0.3680.936
060.642-4.40.73-4.4
070.667-0.5990.174-1.163
081.093-2.484-0.516-1.09
09-2.819-3.573-3.3251.355
10-1.725-0.958-3.5731.227
111.055-1.489-1.725-0.324