Model info
Transcription factorProp1
ModelPROP1_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusWAATKGvRTTW
Best auROC (human)
Best auROC (mouse)0.9211137704758816
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words500
TF familyPaired-related HD factors{3.1.3}
TF subfamilyPROP{3.1.3.20}
MGI109330
EntrezGene19127
UniProt IDPROP1_MOUSE
UniProt ACP97458
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.31143
0.0005 6.241565
0.0001 8.0436
GTEx tissue expression atlas Prop1 expression
Motifs in JASPAR
PCM
ACGT
0188.022.013.0377.0
02455.03.023.019.0
03500.00.00.00.0
0415.034.023.0428.0
0538.055.086.0321.0
06239.00.0261.00.0
07245.068.0149.038.0
08376.09.074.041.0
096.02.03.0489.0
1021.047.02.0430.0
11362.027.021.090.0
PWM
ACGT
01-0.346-1.681-2.1631.096
021.283-3.325-1.64-1.818
031.377-4.4-4.4-4.4
04-2.034-1.27-1.641.222
05-1.163-0.805-0.3680.936
060.642-4.40.73-4.4
070.667-0.5990.174-1.163
081.093-2.484-0.516-1.09
09-2.819-3.573-3.3251.355
10-1.725-0.958-3.5731.227
111.055-1.489-1.725-0.324