Model info
Transcription factorRUNX1
ModelRUNX1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusbhTGTGGTYWn
Best auROC (human)0.9637221964193191
Best auROC (mouse)0.9828466946830174
Peak sets in benchmark (human)115
Peak sets in benchmark (mouse)63
Aligned words500
TF familyRunt-related factors{6.4.1}
TF subfamilyRunx1 (PEBP2alphaB, CBF-alpha2, AML-1){6.4.1.0.2}
HGNC10471
EntrezGene861
UniProt IDRUNX1_HUMAN
UniProt ACQ01196
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.65005
0.0005 5.667455
0.0001 7.74155
GTEx tissue expression atlas RUNX1 expression
ReMap ChIP-seq dataset list RUNX1 datasets
Motifs in JASPAR
PCM
ACGT
0157.0106.0151.0186.0
0275.0235.019.0171.0
0335.04.013.0448.0
041.03.0488.08.0
0516.043.05.0436.0
060.00.0497.03.0
072.01.0495.02.0
082.043.017.0438.0
0914.078.020.0388.0
10142.020.056.0282.0
1169.0176.0123.0132.0
PWM
ACGT
01-0.771-0.1630.1870.393
02-0.5030.626-1.8180.31
03-1.242-3.126-2.1631.268
04-3.903-3.3251.353-2.584
05-1.975-1.044-2.9611.241
06-4.4-4.41.371-3.325
07-3.573-3.9031.367-3.573
08-3.573-1.044-1.921.245
09-2.096-0.464-1.771.124
100.126-1.77-0.7880.807
11-0.5840.339-0.0160.054