Model info
Transcription factorRunx1
ModelRUNX1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
A
Motif rank
0
ConsensusbbYTGTGGTYWb
Best auROC (human)0.963377801537928
Best auROC (mouse)0.984345217844895
Peak sets in benchmark (human)115
Peak sets in benchmark (mouse)63
Aligned words500
TF familyRunt-related factors{6.4.1}
TF subfamilyRunx1 (PEBP2alphaB, CBF-alpha2, AML-1){6.4.1.0.2}
MGI99852
EntrezGene
UniProt IDRUNX1_MOUSE
UniProt ACQ03347
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.453275
0.0005 5.52017
0.0001 7.80999
GTEx tissue expression atlas Runx1 expression
Motifs in JASPAR
PCM
ACGT
0157.0137.0178.0128.0
0257.0141.096.0206.0
0336.0254.022.0188.0
0410.02.03.0485.0
053.03.0493.01.0
0624.048.04.0424.0
071.00.0499.00.0
083.02.0495.00.0
093.033.036.0428.0
1021.0117.010.0352.0
11167.019.053.0261.0
1261.0152.0173.0114.0
PWM
ACGT
01-0.7710.0910.350.023
02-0.7710.119-0.260.495
03-1.2150.703-1.6810.404
04-2.394-3.573-3.3251.347
05-3.325-3.3251.363-3.903
06-1.6-0.938-3.1261.213
07-3.903-4.41.375-4.4
08-3.325-3.5731.367-4.4
09-3.325-1.298-1.2151.222
10-1.725-0.065-2.3941.027
110.287-1.818-0.8410.73
12-0.7050.1930.322-0.091