Model info
Transcription factorRUNX2
ModelRUNX2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensusdbbbTGTGGYKKnb
Best auROC (human)0.9653692494110224
Best auROC (mouse)0.8941028684220238
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)25
Aligned words502
TF familyRunt-related factors{6.4.1}
TF subfamilyRunx2 (PEBP2alphaA, CBF-alpha1){6.4.1.0.1}
HGNC10472
EntrezGene860
UniProt IDRUNX2_HUMAN
UniProt ACQ13950
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.95536
0.0005 5.91451
0.0001 7.855815
GTEx tissue expression atlas RUNX2 expression
ReMap ChIP-seq dataset list RUNX2 datasets
Motifs in JASPAR
PCM
ACGT
0186.038.0158.0218.0
0246.065.0261.0128.0
0357.065.0146.0232.0
0461.0199.088.0152.0
0534.05.08.0453.0
064.08.0462.026.0
0717.014.013.0456.0
081.00.0499.00.0
091.02.0487.010.0
109.073.056.0362.0
1116.069.080.0335.0
1288.013.096.0303.0
1357.055.0194.0194.0
1449.065.0190.0196.0
PWM
ACGT
01-0.368-1.1630.2320.551
02-0.979-0.6430.730.023
03-0.771-0.6430.1540.613
04-0.7050.46-0.3460.193
05-1.27-2.961-2.5841.279
06-3.126-2.5841.298-1.525
07-1.92-2.096-2.1631.285
08-3.903-4.41.375-4.4
09-3.903-3.5731.351-2.394
10-2.484-0.529-0.7881.055
11-1.975-0.584-0.4390.978
12-0.346-2.163-0.260.878
13-0.771-0.8050.4350.435
14-0.918-0.6430.4150.445