Model info
Transcription factorSix4
ModelSIX4_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
C
Motif rank
0
ConsensusndGdMAbhbRAbhbn
Best auROC (human)
Best auROC (mouse)0.9164506134004203
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)4
Aligned words428
TF familyHD-SINE factors{3.1.6}
TF subfamilySIX4-like factors{3.1.6.3}
MGI106034
EntrezGene20474
UniProt IDSIX4_MOUSE
UniProt ACQ61321
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 10.709510000000002
0.0005 12.14086
0.0001 15.021910000000002
GTEx tissue expression atlas Six4 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0138.07.013.044.029.07.010.095.020.03.018.051.016.03.026.043.0
020.03.095.05.02.01.017.00.00.03.063.01.06.09.0217.01.0
032.01.04.01.011.02.00.03.0185.029.054.0124.02.00.02.03.0
04149.037.06.08.019.08.01.04.049.05.03.03.097.023.04.07.0
05295.011.04.04.069.03.00.01.013.00.01.00.016.04.00.02.0
0630.0192.043.0128.02.011.01.04.00.04.00.01.02.01.00.04.0
076.017.09.02.041.093.019.055.011.022.06.05.029.055.020.033.0
0811.06.028.042.032.041.012.0102.02.015.011.026.013.015.021.046.0
0911.08.038.01.019.016.038.04.09.04.055.04.015.011.0186.04.0
1046.04.04.00.035.03.01.00.0293.016.05.03.08.03.01.01.0
1150.0138.0119.075.03.017.04.02.02.08.00.01.00.00.04.00.0
1225.06.019.05.077.043.010.033.064.033.019.011.021.036.010.011.0
1324.097.039.027.012.058.01.047.06.038.010.04.05.049.03.03.0
1410.012.018.07.046.090.036.070.06.015.021.011.07.019.036.019.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.359-1.29-0.6950.5040.091-1.29-0.9491.269-0.275-2.072-0.3780.65-0.493-2.072-0.0160.481
02-4.262-2.0721.269-1.607-2.423-2.968-0.434-4.262-4.262-2.0720.86-2.968-1.436-1.0512.093-2.968
03-2.423-2.968-1.812-2.968-0.857-2.423-4.262-2.0721.9330.0910.7071.534-2.423-4.262-2.423-2.072
041.7180.332-1.436-1.163-0.325-1.163-2.968-1.8120.611-1.607-2.072-2.0721.29-0.137-1.812-1.29
052.399-0.857-1.812-1.8120.951-2.072-4.262-2.968-0.695-4.262-2.968-4.262-0.493-1.812-4.262-2.423
060.1251.970.4811.566-2.423-0.857-2.968-1.812-4.262-1.812-4.262-2.968-2.423-2.968-4.262-1.812
07-1.436-0.434-1.051-2.4230.4341.248-0.3250.725-0.857-0.181-1.436-1.6070.0910.725-0.2750.219
08-0.857-1.4360.0570.4580.1880.434-0.7731.34-2.423-0.556-0.857-0.016-0.695-0.556-0.2270.548
09-0.857-1.1630.359-2.968-0.325-0.4930.359-1.812-1.051-1.8120.725-1.812-0.556-0.8571.939-1.812
100.548-1.812-1.812-4.2620.277-2.072-2.968-4.2622.392-0.493-1.607-2.072-1.163-2.072-2.968-2.968
110.6311.6411.4931.034-2.072-0.434-1.812-2.423-2.423-1.163-4.262-2.968-4.262-4.262-1.812-4.262
12-0.055-1.436-0.325-1.6071.060.481-0.9490.2190.8760.219-0.325-0.857-0.2270.305-0.949-0.857
13-0.0951.290.3840.021-0.7730.778-2.9680.569-1.4360.359-0.949-1.812-1.6070.611-2.072-2.072
14-0.949-0.773-0.378-1.290.5481.2150.3050.965-1.436-0.556-0.227-0.857-1.29-0.3250.305-0.325