Model info
Transcription factorSOX10
ModelSOX10_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
1
ConsensusbbbCTTTSTbYhh
Best auROC (human)0.8326505070567178
Best auROC (mouse)0.832291221250058
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)3
Aligned words505
TF familySOX-related factors{4.1.1}
TF subfamilyGroup E{4.1.1.5}
HGNC11190
EntrezGene6663
UniProt IDSOX10_HUMAN
UniProt ACP56693
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.83816
0.0005 6.603760000000001
0.0001 8.094835
GTEx tissue expression atlas SOX10 expression
ReMap ChIP-seq dataset list SOX10 datasets
Motifs in JASPAR
PCM
ACGT
0149.0167.0112.0172.0
0215.0155.0129.0201.0
0323.0254.069.0154.0
0413.0424.06.057.0
0567.039.01.0393.0
061.075.018.0406.0
076.023.08.0463.0
0815.0121.0328.036.0
0920.03.04.0473.0
1014.0115.0118.0253.0
1118.0239.016.0227.0
1264.0179.062.0195.0
1369.0237.059.0135.0
PWM
ACGT
01-0.9180.287-0.1080.316
02-2.0340.2130.0310.47
03-1.640.703-0.5840.206
04-2.1631.213-2.819-0.771
05-0.613-1.138-3.9031.137
06-3.903-0.503-1.8681.17
07-2.819-1.64-2.5841.3
08-2.034-0.0320.957-1.215
09-1.77-3.325-3.1261.322
10-2.096-0.082-0.0570.699
11-1.8680.642-1.9750.591
12-0.6580.355-0.6890.44
13-0.5840.634-0.7370.076