Model info
Transcription factorSOX7
ModelSOX7_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length16
Quality
D
Motif rank
0
ConsensusRACAMTGhMATTGTYh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words700
TF familySOX-related factors{4.1.1}
TF subfamilyGroup F{4.1.1.6}
HGNC18196
EntrezGene83595
UniProt IDSOX7_HUMAN
UniProt ACQ9BT81
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.26886
0.0005 1.88801
0.0001 5.3289100000000005
GTEx tissue expression atlas SOX7 expression
ReMap ChIP-seq dataset list SOX7 datasets
Motifs in JASPAR
PCM
ACGT
01529.2560.2578.2532.25
02663.757.757.7520.75
036.75671.758.7512.75
04680.56.56.56.5
05354.5340.52.52.5
061.51.51.5695.5
07200.02.0498.00.0
08312.0260.021.0107.0
09425.0190.01.084.0
10700.00.00.00.0
113.012.00.0685.0
120.00.00.0700.0
136.252.25688.253.25
1413.253.253.25680.25
1525.2566.2553.25555.25
1698.5174.588.5338.5
PWM
ACGT
011.1-1.049-0.793-1.651
021.326-2.935-2.935-2.066
03-3.0471.338-2.833-2.508
041.351-3.078-3.078-3.078
050.7010.661-3.754-3.754
06-4.031-4.031-4.0311.373
070.132-3.8831.04-4.681
080.5740.393-2.054-0.486
090.8820.082-4.204-0.724
101.379-4.681-4.681-4.681
11-3.64-2.561-4.6811.358
12-4.681-4.681-4.6811.379
13-3.109-3.8161.362-3.587
14-2.474-3.587-3.5871.351
15-1.882-0.956-1.1691.148
16-0.568-0.003-0.6730.655