Model info
Transcription factorSP1
ModelSP1_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
1
ConsensusvvKGGGCGGGGSbd
Best auROC (human)0.9988915256320506
Best auROC (mouse)0.9414189666227274
Peak sets in benchmark (human)53
Peak sets in benchmark (mouse)11
Aligned words432
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
HGNC11205
EntrezGene6667
UniProt IDSP1_HUMAN
UniProt ACP08047
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.5378600000000002
0.0005 2.61226
0.0001 4.8613599999999995
GTEx tissue expression atlas SP1 expression
ReMap ChIP-seq dataset list SP1 datasets
Motifs in JASPAR
PCM
ACGT
01116.0120.0150.046.0
02101.072.0233.026.0
0343.014.0322.053.0
0431.08.0388.05.0
054.09.0415.04.0
062.09.0418.03.0
0715.0405.00.012.0
0811.03.0410.08.0
092.08.0387.035.0
1032.06.0380.014.0
1134.035.0353.010.0
1225.0335.047.025.0
1327.0239.094.072.0
1471.064.0189.0108.0
PWM
ACGT
010.0710.1040.325-0.835
02-0.066-0.3990.761-1.381
03-0.9-1.9541.083-0.698
04-1.214-2.4431.269-2.822
05-2.988-2.3431.336-2.988
06-3.438-2.3431.343-3.188
07-1.8921.312-4.279-2.092
08-2.169-3.1881.324-2.443
09-3.438-2.4431.266-1.098
10-1.184-2.6791.248-1.954
11-1.126-1.0981.175-2.252
12-1.4181.123-0.814-1.418
13-1.3460.787-0.137-0.399
14-0.412-0.5140.5540.0