Model info
Transcription factorSp2
ModelSP2_MOUSE.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
1
ConsensusdRRGGGCGGGRM
Best auROC (human)0.8932684252311811
Best auROC (mouse)
Peak sets in benchmark (human)16
Peak sets in benchmark (mouse)
Aligned words498
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
MGI1926162
EntrezGene78912
UniProt IDSP2_MOUSE
UniProt ACQ9D2H6
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.85566
0.0005 3.9869649999999996
0.0001 6.240815
GTEx tissue expression atlas Sp2 expression
Motifs in JASPAR
PCM
ACGT
01224.041.0172.061.0
02129.016.0333.020.0
0375.03.0368.052.0
04178.00.0320.00.0
052.02.0494.00.0
061.02.0493.02.0
0779.0385.00.034.0
0811.06.0470.011.0
093.01.0483.011.0
1049.010.0410.029.0
11114.017.0345.022.0
12119.0320.039.020.0
PWM
ACGT
010.582-1.0860.32-0.701
020.035-1.9710.976-1.766
03-0.499-3.3211.076-0.856
040.354-4.3970.936-4.397
05-3.569-3.5691.369-4.397
06-3.9-3.5691.367-3.569
07-0.4481.121-4.397-1.266
08-2.307-2.8151.319-2.307
09-3.321-3.91.347-2.307
10-0.914-2.391.183-1.417
11-0.087-1.9161.011-1.677
12-0.0450.936-1.134-1.766