Model info
Transcription factorSP4
ModelSP4_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
1
ConsensusRvRRRGGGMGGRGvnd
Best auROC (human)0.9826502647505044
Best auROC (mouse)
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)
Aligned words496
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
HGNC11209
EntrezGene6671
UniProt IDSP4_HUMAN
UniProt ACQ02446
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.79411
0.0005 3.9256599999999997
0.0001 6.27191
GTEx tissue expression atlas SP4 expression
ReMap ChIP-seq dataset list SP4 datasets
Motifs in JASPAR
PCM
ACGT
0199.024.0354.019.0
02168.045.0251.032.0
03242.014.0204.036.0
04181.012.0288.015.0
05111.06.0325.054.0
06108.03.0382.03.0
074.02.0486.04.0
089.05.0480.02.0
09168.0301.00.027.0
107.00.0476.013.0
117.07.0455.027.0
12126.05.0347.018.0
1370.011.0402.013.0
14128.0272.061.035.0
1572.0178.0110.0136.0
16109.044.0219.0124.0
PWM
ACGT
01-0.222-1.5921.041-1.81
020.3-0.9920.699-1.32
030.663-2.0890.493-1.207
040.374-2.2260.836-2.026
05-0.109-2.8110.956-0.815
06-0.136-3.3171.117-3.317
07-3.119-3.5651.357-3.119
08-2.476-2.9531.344-3.565
090.30.88-4.393-1.481
10-2.687-4.3931.336-2.155
11-2.687-2.6871.291-1.481
120.016-2.9531.021-1.86
13-0.562-2.3031.168-2.155
140.0310.779-0.697-1.234
15-0.5350.358-0.1180.091
16-0.127-1.0140.5630.0