Model info
Transcription factorSp5
ModelSP5_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length24
Quality
C
Motif rank
0
ConsensusvdddRRRvRRvRvdRRGGGMGGRG
Best auROC (human)
Best auROC (mouse)0.9562511041566459
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words499
TF familyThree-zinc finger Kr├╝ppel-related factors{2.3.1}
TF subfamilySp1-like factors{2.3.1.1}
MGI1927715
EntrezGene64406
UniProt IDSP5_MOUSE
UniProt ACQ9JHX2
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.17891
0.0005 4.28356
0.0001 6.609210000000001
GTEx tissue expression atlas Sp5 expression
Motifs in JASPAR
PCM
ACGT
01141.069.0235.054.0
02163.053.0197.086.0
0394.055.0286.064.0
04119.035.0271.074.0
05176.028.0268.027.0
06104.035.0316.044.0
07104.071.0297.027.0
08185.089.0163.062.0
09103.029.0289.078.0
1092.058.0302.047.0
11144.049.0261.045.0
1282.032.0351.034.0
13167.085.0204.043.0
14211.038.0151.099.0
15115.031.0304.049.0
16117.016.0270.096.0
17131.03.0356.09.0
1815.011.0469.04.0
1913.016.0456.014.0
20307.0132.04.056.0
2159.08.0408.024.0
224.012.0468.015.0
23250.00.0244.05.0
2428.012.0436.023.0
PWM
ACGT
010.121-0.5820.627-0.821
020.265-0.840.452-0.366
03-0.279-0.8040.823-0.656
04-0.047-1.240.769-0.514
050.341-1.4520.758-1.487
06-0.179-1.240.922-1.02
07-0.179-0.5540.86-1.487
080.39-0.3330.265-0.687
09-0.189-1.4190.833-0.462
10-0.3-0.7520.877-0.956
110.142-0.9160.732-0.998
12-0.413-1.3261.027-1.268
130.289-0.3780.487-1.042
140.521-1.1610.189-0.228
15-0.08-1.3560.883-0.916
16-0.063-1.9730.765-0.258
170.048-3.3231.041-2.482
18-2.032-2.3091.315-3.124
19-2.161-1.9731.287-2.094
200.8930.056-3.124-0.786
21-0.735-2.5821.176-1.598
22-3.124-2.2321.313-2.032
230.689-4.3980.665-2.959
24-1.452-2.2321.243-1.638