Model info
Transcription factorSPI1
ModelSPI1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusvvRRWRRGGAAGTGvvd
Best auROC (human)0.998789596548964
Best auROC (mouse)0.9968861851342249
Peak sets in benchmark (human)80
Peak sets in benchmark (mouse)204
Aligned words500
TF familyEts-related factors{3.5.2}
TF subfamilySpi-like factors{3.5.2.5}
HGNC11241
EntrezGene6688
UniProt IDSPI1_HUMAN
UniProt ACP17947
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.65151
0.0005 4.93196
0.0001 7.54891
GTEx tissue expression atlas SPI1 expression
ReMap ChIP-seq dataset list SPI1 datasets
Motifs in JASPAR
PCM
ACGT
01212.0102.0127.059.0
02246.050.0165.039.0
03343.022.084.051.0
04386.014.063.037.0
05326.07.059.0108.0
0674.034.0377.015.0
07361.024.0112.03.0
0829.00.0471.00.0
091.00.0499.00.0
10500.00.00.00.0
11499.00.00.01.0
1218.085.0397.00.0
1334.026.020.0420.0
1421.061.0408.010.0
15227.061.0166.046.0
16180.091.0159.070.0
17199.065.0129.0107.0
PWM
ACGT
010.523-0.2010.016-0.737
020.671-0.8980.275-1.138
031.002-1.681-0.392-0.879
041.119-2.096-0.673-1.189
050.951-2.694-0.737-0.144
06-0.516-1.271.096-2.034
071.053-1.6-0.108-3.325
08-1.421-4.41.317-4.4
09-3.903-4.41.375-4.4
101.377-4.4-4.4-4.4
111.375-4.4-4.4-3.903
12-1.868-0.381.147-4.4
13-1.27-1.525-1.771.203
14-1.725-0.7051.174-2.394
150.591-0.7050.281-0.979
160.361-0.3130.238-0.57
170.46-0.6430.031-0.153