Model info
Transcription factorSpi1
ModelSPI1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusvvRRWGRGGAAGTGn
Best auROC (human)0.9989822566057306
Best auROC (mouse)0.9974621563740513
Peak sets in benchmark (human)80
Peak sets in benchmark (mouse)204
Aligned words482
TF familyEts-related factors{3.5.2}
TF subfamilySpi-like factors{3.5.2.5}
MGI98282
EntrezGene20375
UniProt IDSPI1_MOUSE
UniProt ACP17433
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.5613099999999998
0.0005 4.85491
0.0001 7.511010000000001
GTEx tissue expression atlas Spi1 expression
Motifs in JASPAR
PCM
ACGT
01192.098.0132.059.0
02208.057.0175.041.0
03330.020.087.044.0
04315.031.095.040.0
05308.02.064.0107.0
0666.024.0380.011.0
07334.024.0116.07.0
0824.02.0455.00.0
092.00.0479.00.0
10480.00.01.00.0
11480.00.01.00.0
1214.076.0391.00.0
1334.014.09.0424.0
144.066.0408.03.0
15163.0102.0163.053.0
PWM
ACGT
010.463-0.2020.092-0.699
020.543-0.7330.371-1.052
031.001-1.732-0.319-0.984
040.955-1.32-0.232-1.076
050.933-3.537-0.62-0.115
06-0.59-1.5621.142-2.273
071.013-1.562-0.036-2.657
08-1.562-3.5371.321-4.368
09-3.537-4.3681.373-4.368
101.375-4.368-3.869-4.368
111.375-4.368-3.869-4.368
12-2.059-0.4511.17-4.368
13-1.232-2.059-2.4471.251
14-3.09-0.591.213-3.289
150.301-0.1620.301-0.803