Model info
Transcription factorSPIB
ModelSPIB_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusvvRRWRRGGAAGTGRvd
Best auROC (human)0.9979146501398
Best auROC (mouse)0.9489263383055907
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)3
Aligned words500
TF familyEts-related factors{3.5.2}
TF subfamilySpi-like factors{3.5.2.5}
HGNC11242
EntrezGene6689
UniProt IDSPIB_HUMAN
UniProt ACQ01892
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.80931
0.0005 4.203860000000001
0.0001 7.09766
GTEx tissue expression atlas SPIB expression
ReMap ChIP-seq dataset list SPIB datasets
Motifs in JASPAR
PCM
ACGT
01202.093.0124.081.0
02230.058.0174.038.0
03376.016.059.049.0
04359.016.087.038.0
05334.07.051.0108.0
0682.026.0386.06.0
07329.037.0130.04.0
0838.00.0462.00.0
090.00.0500.00.0
10500.00.00.00.0
11495.00.01.04.0
1211.0103.0385.01.0
138.04.07.0481.0
142.024.0471.03.0
15290.053.0134.023.0
16232.059.0157.052.0
17270.059.0102.069.0
PWM
ACGT
010.475-0.291-0.008-0.427
020.604-0.7540.327-1.163
031.093-1.975-0.737-0.918
041.047-1.975-0.357-1.163
050.975-2.694-0.879-0.144
06-0.415-1.5251.119-2.819
070.96-1.1890.039-3.126
08-1.163-4.41.298-4.4
09-4.4-4.41.377-4.4
101.377-4.4-4.4-4.4
111.367-4.4-3.903-3.126
12-2.311-0.1911.117-3.903
13-2.584-3.126-2.6941.338
14-3.573-1.61.317-3.325
150.835-0.8410.069-1.64
160.613-0.7370.225-0.86
170.763-0.737-0.201-0.584