Model info
Transcription factorSpib
ModelSPIB_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusRAAWGRGGAAGTGRvWn
Best auROC (human)0.9964154895974779
Best auROC (mouse)0.9766346599995067
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)3
Aligned words458
TF familyEts-related factors{3.5.2}
TF subfamilySpi-like factors{3.5.2.5}
MGI892986
EntrezGene272382
UniProt IDSPIB_MOUSE
UniProt ACO35906
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.1007599999999997
0.0005 3.5712099999999998
0.0001 6.64096
GTEx tissue expression atlas Spib expression
Motifs in JASPAR
PCM
ACGT
01261.029.0141.027.0
02365.012.050.031.0
03371.010.060.017.0
04328.09.038.083.0
0557.029.0365.07.0
06314.035.0106.03.0
0727.00.0431.00.0
080.00.0458.00.0
09458.00.00.00.0
10455.00.00.03.0
1114.058.0386.00.0
1210.06.02.0440.0
130.07.0450.01.0
14267.042.0134.015.0
15216.060.0133.049.0
16291.043.058.066.0
17108.0151.0133.066.0
PWM
ACGT
010.817-1.3350.206-1.403
021.15-2.149-0.812-1.272
031.166-2.309-0.634-1.834
041.044-2.399-1.077-0.317
05-0.684-1.3351.15-2.61
061.0-1.156-0.076-3.243
07-1.403-4.3271.316-4.327
08-4.327-4.3271.376-4.327
091.376-4.327-4.327-4.327
101.37-4.327-4.327-3.243
11-2.011-0.6671.206-4.327
12-2.309-2.735-3.4921.336
13-4.327-2.611.359-3.825
140.839-0.980.155-1.949
150.628-0.6340.148-0.831
160.925-0.958-0.667-0.541
17-0.0580.2740.148-0.541