Model info
Transcription factorSREBF1
ModelSRBP1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusdRKSRSGTGAb
Best auROC (human)0.9204768850030464
Best auROC (mouse)0.6695929231433003
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)23
Aligned words500
TF familybHLH-ZIP factors{1.2.6}
TF subfamilySREBP factors{1.2.6.3}
HGNC11289
EntrezGene6720
UniProt IDSRBP1_HUMAN
UniProt ACP36956
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.69872
0.0005 5.50945
0.0001 7.08964
GTEx tissue expression atlas SREBF1 expression
ReMap ChIP-seq dataset list SREBF1 datasets
Motifs in JASPAR
PCM
ACGT
01142.057.0188.0113.0
02137.060.0276.027.0
0321.09.083.0387.0
0410.0219.0266.05.0
05195.06.0220.079.0
0616.096.0310.078.0
0713.043.0441.03.0
0883.05.015.0397.0
090.07.0493.00.0
10420.015.022.043.0
115.0156.0187.0152.0
PWM
ACGT
010.126-0.7710.404-0.1
020.091-0.7210.785-1.489
03-1.725-2.484-0.4031.122
04-2.3940.5550.749-2.961
050.44-2.8190.56-0.452
06-1.975-0.260.901-0.464
07-2.163-1.0441.252-3.325
08-0.403-2.961-2.0341.147
09-4.4-2.6941.363-4.4
101.203-2.034-1.681-1.044
11-2.9610.2190.3990.193