Model info
Transcription factorSTAT1
(GeneCards)
ModelSTAT1_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
1
ConsensusvRRRAAhnGAAAShdRRdn
Best auROC (human)0.992
Best auROC (mouse)0.962
Peak sets in benchmark (human)37
Peak sets in benchmark (mouse)128
Aligned words500
TF familySTAT factors {6.2.1}
TF subfamilySTAT1 {6.2.1.0.1}
HGNCHGNC:11362
EntrezGeneGeneID:6772
(SSTAR profile)
UniProt IDSTAT1_HUMAN
UniProt ACP42224
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.37636
0.0005 6.41411
0.0001 8.55071
GTEx tissue expression atlas STAT1 expression
ReMap ChIP-seq dataset list STAT1 datasets
Motifs in JASPAR
PCM
ACGT
01198.077.0151.074.0
02218.046.0216.020.0
03158.09.0312.021.0
04325.07.0160.08.0
05475.09.013.03.0
06434.026.036.04.0
07235.0108.066.091.0
08141.076.099.0184.0
0956.07.0428.09.0
10461.06.031.02.0
11463.06.029.02.0
12473.012.010.05.0
1339.0270.0171.020.0
1497.097.020.0286.0
15123.051.0244.082.0
16351.040.063.046.0
17309.058.087.046.0
18286.056.089.069.0
1994.0149.0180.077.0
PWM
ACGT
010.455-0.4770.187-0.516
020.551-0.9790.542-1.77
030.232-2.4840.907-1.725
040.948-2.6940.244-2.584
051.326-2.484-2.163-3.325
061.236-1.525-1.215-3.126
070.626-0.144-0.628-0.313
080.119-0.49-0.230.383
09-0.788-2.6941.222-2.484
101.296-2.819-1.358-3.573
111.3-2.819-1.421-3.573
121.322-2.234-2.394-2.961
13-1.1380.7630.31-1.77
14-0.25-0.25-1.770.821
15-0.016-0.8790.663-0.415
161.025-1.114-0.673-0.979
170.898-0.754-0.357-0.979
180.821-0.788-0.335-0.584
19-0.2810.1740.361-0.477