Model info
Transcription factorSTAT1
ModelSTAT1_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length19
Quality
A
Motif rank
1
ConsensusvRRRAAhnGAAAShdRRdn
Best auROC (human)0.9924955452682301
Best auROC (mouse)0.9620832786969477
Peak sets in benchmark (human)37
Peak sets in benchmark (mouse)128
Aligned words500
TF familySTAT factors{6.2.1}
TF subfamilySTAT1{6.2.1.0.1}
HGNC11362
EntrezGene6772
UniProt IDSTAT1_HUMAN
UniProt ACP42224
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.37636
0.0005 6.41411
0.0001 8.55071
GTEx tissue expression atlas STAT1 expression
ReMap ChIP-seq dataset list STAT1 datasets
Motifs in JASPAR
PCM
ACGT
01198.077.0151.074.0
02218.046.0216.020.0
03158.09.0312.021.0
04325.07.0160.08.0
05475.09.013.03.0
06434.026.036.04.0
07235.0108.066.091.0
08141.076.099.0184.0
0956.07.0428.09.0
10461.06.031.02.0
11463.06.029.02.0
12473.012.010.05.0
1339.0270.0171.020.0
1497.097.020.0286.0
15123.051.0244.082.0
16351.040.063.046.0
17309.058.087.046.0
18286.056.089.069.0
1994.0149.0180.077.0
PWM
ACGT
010.455-0.4770.187-0.516
020.551-0.9790.542-1.77
030.232-2.4840.907-1.725
040.948-2.6940.244-2.584
051.326-2.484-2.163-3.325
061.236-1.525-1.215-3.126
070.626-0.144-0.628-0.313
080.119-0.49-0.230.383
09-0.788-2.6941.222-2.484
101.296-2.819-1.358-3.573
111.3-2.819-1.421-3.573
121.322-2.234-2.394-2.961
13-1.1380.7630.31-1.77
14-0.25-0.25-1.770.821
15-0.016-0.8790.663-0.415
161.025-1.114-0.673-0.979
170.898-0.754-0.357-0.979
180.821-0.788-0.335-0.584
19-0.2810.1740.361-0.477