Model info
Transcription factorTaf1
ModelTAF1_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length18
Quality
A
Motif rank
0
ConsensusvRvvRWGGMRGMvvvvvn
Best auROC (human)0.8456118385790314
Best auROC (mouse)0.9190309711168106
Peak sets in benchmark (human)61
Peak sets in benchmark (mouse)2
Aligned words500
TF familyTCF-7-related factors{4.1.3}
TF subfamilyTAF-1 (TAF-2A, TAF(II)250) [1]{4.1.3.0.5}
MGI1336878
EntrezGene270627
UniProt IDTAF1_MOUSE
UniProt ACQ80UV9
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.567310000000001
0.0005 9.18291
0.0001 12.44766
GTEx tissue expression atlas Taf1 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0151.04.037.011.0127.010.019.06.074.05.080.014.027.07.021.07.0
02185.032.046.016.014.08.01.03.066.047.023.021.017.010.06.05.0
03102.030.0135.015.053.07.017.020.038.013.023.02.019.09.014.03.0
04119.06.081.06.030.05.020.04.0126.04.051.08.017.05.017.01.0
0566.015.06.0205.06.02.00.012.062.046.06.055.08.04.00.07.0
062.01.0139.00.01.00.063.03.00.00.012.00.02.01.0275.01.0
070.01.04.00.00.00.02.00.021.03.0463.02.01.00.03.00.0
084.018.00.00.01.02.00.01.081.0361.08.022.00.01.00.01.0
0925.06.054.01.048.037.0250.047.07.01.00.00.00.04.015.05.0
107.07.066.00.03.02.041.02.023.038.0253.05.02.010.040.01.0
1116.015.03.01.09.033.04.011.080.0242.062.016.00.04.01.03.0
1228.014.059.04.060.049.0145.040.034.08.021.07.04.03.015.09.0
1338.08.076.04.012.07.044.011.045.063.0119.013.03.020.031.06.0
1418.032.039.09.08.056.06.028.049.0154.040.027.06.015.04.09.0
1510.016.048.07.040.062.0122.033.024.027.033.05.010.015.039.09.0
1623.012.041.08.043.09.059.09.047.043.0125.027.014.06.023.011.0
1725.030.065.07.014.018.020.018.058.087.059.044.08.019.015.013.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.485-1.9750.167-1.0221.393-1.114-0.49-1.60.855-1.770.932-0.788-0.144-1.454-0.392-1.454
021.7680.0230.383-0.658-0.788-1.328-3.126-2.2340.7410.404-0.302-0.392-0.599-1.114-1.6-1.77
031.174-0.041.454-0.7210.523-1.454-0.599-0.4390.193-0.86-0.302-2.584-0.49-1.215-0.788-2.234
041.328-1.60.945-1.6-0.04-1.77-0.439-1.9751.385-1.9750.485-1.328-0.599-1.77-0.599-3.126
050.741-0.721-1.61.871-1.6-2.584-4.4-0.9380.6790.383-1.60.56-1.328-1.975-4.4-1.454
06-2.584-3.1261.483-4.4-3.126-4.40.695-2.234-4.4-4.4-0.938-4.4-2.584-3.1262.164-3.126
07-4.4-3.126-1.975-4.4-4.4-4.4-2.584-4.4-0.392-2.2342.684-2.584-3.126-4.4-2.234-4.4
08-1.975-0.543-4.4-4.4-3.126-2.584-4.4-3.1260.9452.436-1.328-0.346-4.4-3.126-4.4-3.126
09-0.22-1.60.542-3.1260.4250.1672.0690.404-1.454-3.126-4.4-4.4-4.4-1.975-0.721-1.77
10-1.454-1.4540.741-4.4-2.234-2.5840.269-2.584-0.3020.1932.081-1.77-2.584-1.1140.244-3.126
11-0.658-0.721-2.234-3.126-1.2150.054-1.975-1.0220.9322.0360.679-0.658-4.4-1.975-3.126-2.234
12-0.108-0.7880.63-1.9750.6460.4451.5250.2440.083-1.328-0.392-1.454-1.975-2.234-0.721-1.215
130.193-1.3280.881-1.975-0.938-1.4540.339-1.0220.3610.6951.328-0.86-2.234-0.439-0.008-1.6
14-0.5430.0230.219-1.215-1.3280.578-1.6-0.1080.4451.5850.244-0.144-1.6-0.721-1.975-1.215
15-1.114-0.6580.425-1.4540.2440.6791.3530.054-0.26-0.1440.054-1.77-1.114-0.7210.219-1.215
16-0.302-0.9380.269-1.3280.316-1.2150.63-1.2150.4040.3161.377-0.144-0.788-1.6-0.302-1.022
17-0.22-0.040.726-1.454-0.788-0.543-0.439-0.5430.6131.0160.630.339-1.328-0.49-0.721-0.86