Model info
Transcription factorTBX1
(GeneCards)
ModelTBX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length20
Quality
D
Motif rank
0
ConsensusRKKbGGGhRGGGGYGGGhdd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words4716
TF familyTBX1-related factors {6.5.3}
TF subfamilyTBX1 {6.5.3.0.1}
HGNCHGNC:11592
EntrezGeneGeneID:6899
(SSTAR profile)
UniProt IDTBX1_HUMAN
UniProt ACO43435
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 0.92336
0.0005 2.2260099999999996
0.0001 4.98221
GTEx tissue expression atlas TBX1 expression
ReMap ChIP-seq dataset list TBX1 datasets
Motifs in JASPAR
PCM
ACGT
01541.0368.03364.0443.0
02399.0376.03451.0490.0
03316.25375.253491.25533.25
04783.751093.75864.751973.75
05305.75237.753926.75245.75
06236.5185.53816.5477.5
07254.75128.754104.75227.75
08907.751931.75694.751181.75
093779.5186.5519.5230.5
1084.072.04473.087.0
1118.028.04596.074.0
1216.066.03554.01080.0
1331.2541.254599.2544.25
14350.51036.5233.53095.5
1524.539.54515.5136.5
161004.7519.753657.7533.75
17833.2578.253642.25162.25
181126.751894.75820.75873.75
191243.75492.751610.751368.75
20989.5602.51767.51356.5
PWM
ACGT
01-0.777-1.161.047-0.976
02-1.08-1.1391.073-0.876
03-1.311-1.1411.084-0.791
04-0.407-0.075-0.3090.515
05-1.345-1.5941.202-1.561
06-1.599-1.841.173-0.901
07-1.526-2.21.246-1.637
08-0.2610.493-0.5280.002
091.164-1.835-0.817-1.625
10-2.619-2.7691.332-2.584
11-4.073-3.6691.359-2.742
12-4.177-2.8531.102-0.088
13-3.567-3.3051.36-3.238
14-1.209-0.129-1.6120.964
15-3.793-3.3461.342-2.143
16-0.16-3.9891.131-3.494
17-0.346-2.6881.127-1.972
18-0.0450.474-0.361-0.299
190.053-0.870.3120.149
20-0.175-0.670.4040.14