Model info
Transcription factorTBX4
ModelTBX4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length20
Quality
D
Motif rank
0
ConsensusdAGGTGYKAhWhnYvMMMYb
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words16745
TF familyTBX2-related factors{6.5.4}
TF subfamilyTBX4{6.5.4.0.3}
HGNC11603
EntrezGene9496
UniProt IDTBX4_HUMAN
UniProt ACP57082
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.78441
0.0005 4.80861
0.0001 6.96341
GTEx tissue expression atlas TBX4 expression
ReMap ChIP-seq dataset list TBX4 datasets
Motifs in JASPAR
PCM
ACGT
016793.751707.754266.752945.75
0213760.75522.75802.75627.75
031115.51036.513049.5512.5
04245.75269.7514955.75242.75
05395.251164.25397.2513757.25
06374.5352.514634.5352.5
071236.751579.75462.7512434.75
08733.52494.59714.52771.5
0913562.0451.01197.0504.0
106727.02759.02453.03775.0
119033.251332.251336.254012.25
125468.251452.251214.257579.25
133916.753466.753430.754899.75
141926.03481.01142.09165.0
154874.255834.253875.251130.25
169696.752116.752075.751824.75
171748.2512343.25873.25749.25
1810175.02299.02260.0980.0
191060.012011.01305.01338.0
201783.757580.752594.753754.75
PWM
ACGT
010.547-0.8320.083-0.288
021.253-2.013-1.586-1.831
03-1.257-1.3311.2-2.033
04-2.763-2.671.336-2.775
05-2.291-1.215-2.2861.253
06-2.345-2.4051.315-2.405
07-1.154-0.91-2.1341.152
08-1.676-0.4540.905-0.349
091.239-2.16-1.187-2.049
100.538-0.353-0.471-0.04
110.832-1.08-1.0770.021
120.331-0.994-1.1730.657
13-0.003-0.125-0.1350.221
14-0.712-0.121-1.2340.847
150.2160.395-0.014-1.244
160.903-0.618-0.637-0.766
17-0.8091.144-1.502-1.654
180.951-0.535-0.552-1.387
19-1.3081.117-1.101-1.076
20-0.7890.657-0.414-0.045