Model info
Transcription factorTef
ModelTEF_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
D
Motif rank
0
ConsensusTGdTKAYRTMdvYd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words14
TF familyC/EBP-related{1.1.8}
TF subfamilyPAR factors{1.1.8.2}
MGI98663
EntrezGene21685
UniProt IDTEF_MOUSE
UniProt ACQ9JLC6
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.32801
0.0005 5.97236
0.0001 7.318365
GTEx tissue expression atlas Tef expression
Motifs in JASPAR
PCM
ACGT
010.6761.8530.67610.794
022.1180.010.7061.176
033.1761.0592.9416.824
040.00.00.014.0
053.1760.03.4127.412
0613.1760.00.8240.0
071.0593.8820.09.059
084.3530.08.8240.824
090.00.5882.11811.294
108.7063.4121.0590.824
119.7650.02.1182.118
126.04.3532.5881.059
130.5882.8242.1188.471
142.5290.4125.9415.118
PWM
ACGT
01-1.136-0.504-1.1361.013
02-0.404-1.8411.005-0.818
03-0.081-0.884-0.1440.587
04-1.841-1.841-1.8411.26
05-0.081-1.841-0.0210.663
061.202-1.841-1.031-1.841
07-0.8840.088-1.8410.849
080.187-1.8410.824-1.031
09-1.841-1.204-0.4041.056
100.812-0.021-0.884-1.031
110.919-1.841-0.404-0.404
120.4710.187-0.247-0.884
13-1.204-0.177-0.4040.786
14-0.266-1.3560.4620.328