Model info
Transcription factorTfcp2l1
ModelTF2L1_MOUSE.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
C
Motif rank
1
ConsensusdRRCYGGYYb
Best auROC (human)
Best auROC (mouse)0.96219551394896
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words502
TF familyCP2-related factors{6.7.2}
TF subfamilyCP2-L1 (LBP-9, CRTR-1){6.7.2.0.2}
MGI2444691
EntrezGene81879
UniProt IDTF2L1_MOUSE
UniProt ACQ3UNW5
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.085915
0.0005 6.121395
0.0001 7.84093
GTEx tissue expression atlas Tfcp2l1 expression
Motifs in JASPAR
PCM
ACGT
01207.034.0193.066.0
02302.07.0170.021.0
03332.020.0111.037.0
040.0499.00.01.0
0541.094.00.0365.0
062.00.0494.04.0
070.02.0496.02.0
0890.0146.09.0255.0
0933.075.013.0379.0
1026.0167.087.0220.0
PWM
ACGT
010.5-1.270.43-0.628
020.875-2.6940.304-1.725
030.969-1.77-0.117-1.189
04-4.41.375-4.4-3.903
05-1.09-0.281-4.41.063
06-3.573-4.41.365-3.126
07-4.4-3.5731.369-3.573
08-0.3240.154-2.4840.707
09-1.298-0.503-2.1631.101
10-1.5250.287-0.3570.56