Model info
Transcription factorRELA
ModelTF65_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
A
Motif rank
0
ConsensushdGGGRhTTTCChv
Best auROC (human)0.9766095871410527
Best auROC (mouse)0.9063626090576038
Peak sets in benchmark (human)188
Peak sets in benchmark (mouse)99
Aligned words500
TF familyNF-kappaB-related factors{6.1.1}
TF subfamilyNF-kappaB p65 subunit-like factors{6.1.1.2}
HGNC9955
EntrezGene5970
UniProt IDTF65_HUMAN
UniProt ACQ04206
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.27621
0.0005 5.42106
0.0001 7.74361
GTEx tissue expression atlas RELA expression
ReMap ChIP-seq dataset list RELA datasets
Motifs in JASPAR
PCM
ACGT
01136.0194.066.0104.0
02239.039.065.0157.0
0310.07.0460.023.0
043.00.0490.07.0
055.00.0451.044.0
06278.05.0198.019.0
07270.0119.033.078.0
08120.09.02.0369.0
095.09.05.0481.0
104.090.00.0406.0
118.0465.01.026.0
1212.0467.03.018.0
13214.0179.038.069.0
14163.0109.0167.061.0
PWM
ACGT
010.0830.435-0.628-0.181
020.642-1.138-0.6430.225
03-2.394-2.6941.294-1.64
04-3.325-4.41.357-2.694
05-2.961-4.41.274-1.022
060.793-2.9610.455-1.818
070.763-0.049-1.298-0.464
08-0.04-2.484-3.5731.074
09-2.961-2.484-2.9611.338
10-3.126-0.324-4.41.17
11-2.5841.305-3.903-1.525
12-2.2341.309-3.325-1.868
130.5330.355-1.163-0.584
140.263-0.1350.287-0.705