Model info
Transcription factorRela
ModelTF65_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusKGGRvTTTCCM
Best auROC (human)0.9742156728406077
Best auROC (mouse)0.9313125134142133
Peak sets in benchmark (human)188
Peak sets in benchmark (mouse)99
Aligned words500
TF familyNF-kappaB-related factors{6.1.1}
TF subfamilyNF-kappaB p65 subunit-like factors{6.1.1.2}
MGI103290
EntrezGene19697
UniProt IDTF65_MOUSE
UniProt ACQ04207
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.602085000000001
0.0005 5.6486149999999995
0.0001 7.679875
GTEx tissue expression atlas Rela expression
Motifs in JASPAR
PCM
ACGT
0135.024.0288.0153.0
0212.03.0469.016.0
034.01.0461.034.0
04275.023.0187.015.0
05206.0150.094.050.0
060.027.03.0470.0
074.014.09.0473.0
087.0118.08.0367.0
094.0471.03.022.0
105.0466.01.028.0
11119.0292.032.057.0
PWM
ACGT
01-1.242-1.60.8280.2
02-2.234-3.3251.313-1.975
03-3.126-3.9031.296-1.27
040.782-1.640.399-2.034
050.4950.18-0.281-0.898
06-4.4-1.489-3.3251.315
07-3.126-2.096-2.4841.322
08-2.694-0.057-2.5841.069
09-3.1261.317-3.325-1.681
10-2.9611.307-3.903-1.454
11-0.0490.841-1.328-0.771