Model info
Transcription factorTCF7L1
ModelTF7L1_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
B
Motif rank
0
ConsensusdbbCTTTSAWSWb
Best auROC (human)0.9259450164457139
Best auROC (mouse)0.7409575034890606
Peak sets in benchmark (human)10
Peak sets in benchmark (mouse)10
Aligned words500
TF familyTCF-7-related factors{4.1.3}
TF subfamilyTCF-7L1 (TCF-3) [1]{4.1.3.0.2}
HGNC11640
EntrezGene83439
UniProt IDTF7L1_HUMAN
UniProt ACQ9HCS4
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.821865
0.0005 6.656915
0.0001 8.32433
GTEx tissue expression atlas TCF7L1 expression
ReMap ChIP-seq dataset list TCF7L1 datasets
Motifs in JASPAR
PCM
ACGT
01120.069.0111.0200.0
0239.0140.0165.0156.0
0355.0204.0106.0135.0
0411.0402.024.063.0
053.023.01.0473.0
060.026.06.0468.0
075.00.05.0490.0
0821.087.0360.032.0
09447.010.09.034.0
10185.03.06.0306.0
1140.0191.0248.021.0
1286.049.027.0338.0
1336.0154.0137.0173.0
PWM
ACGT
01-0.04-0.584-0.1170.465
02-1.1380.1120.2750.219
03-0.8050.485-0.1630.076
04-2.3111.16-1.6-0.673
05-3.325-1.64-3.9031.322
06-4.4-1.525-2.8191.311
07-2.961-4.4-2.9611.357
08-1.725-0.3571.05-1.328
091.265-2.394-2.484-1.27
100.388-3.325-2.8190.888
11-1.1140.420.679-1.725
12-0.368-0.918-1.4890.987
13-1.2150.2060.0910.322