Model info
Transcription factorTFCP2
ModelTFCP2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length16
Quality
D
Motif rank
0
ConsensusSSCWGvnMdvRCMRGM
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words13
TF familyCP2-related factors{6.7.2}
TF subfamilyCP2 (LSF, SEF){6.7.2.0.1}
HGNC11748
EntrezGene7024
UniProt IDTFCP2_HUMAN
UniProt ACQ12800
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.740209999999999
0.0005 5.40471
0.0001 6.78176
GTEx tissue expression atlas TFCP2 expression
ReMap ChIP-seq dataset list TFCP2 datasets
Motifs in JASPAR
PCM
ACGT
010.5454.3026.5561.597
020.07.8152.632.555
032.25410.370.00.376
043.4190.1882.4426.951
050.00.75111.1971.052
065.7863.6822.481.052
074.1333.5322.4052.931
083.1566.5380.3762.931
094.2830.3763.1565.185
102.1423.1946.1241.54
115.8240.1886.8010.188
120.010.8212.1790.0
132.2549.3180.01.428
145.8990.1884.6212.292
150.00.013.00.0
169.5431.4280.6761.353
PWM
ACGT
01-1.1880.2390.615-0.553
02-1.8030.776-0.174-0.197
03-0.2961.04-1.803-1.342
040.043-1.546-0.2330.668
05-1.803-1.0271.113-0.832
060.5020.105-0.221-0.832
070.2040.07-0.245-0.086
08-0.0240.612-1.342-0.086
090.235-1.342-0.0240.404
10-0.335-0.0150.553-0.579
110.508-1.5460.648-1.546
12-1.8031.08-0.322-1.803
13-0.2960.94-1.803-0.632
140.519-1.5460.302-0.283
15-1.803-1.8031.254-1.803
160.962-0.632-1.083-0.669