Model info
Transcription factorTCF3
ModelTFE2_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
0
ConsensusvMCASCTGShn
Best auROC (human)0.9255476630449558
Best auROC (mouse)0.9773963428040655
Peak sets in benchmark (human)9
Peak sets in benchmark (mouse)60
Aligned words503
TF familyE2A-related factors{1.2.1}
TF subfamilyE2A (TCF-3, ITF-1){1.2.1.0.1}
HGNC11633
EntrezGene6929
UniProt IDTFE2_HUMAN
UniProt ACP15923
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.873295
0.0005 4.938465
0.0001 7.551995
GTEx tissue expression atlas TCF3 expression
ReMap ChIP-seq dataset list TCF3 datasets
Motifs in JASPAR
PCM
ACGT
01111.0247.0126.016.0
02251.0162.085.02.0
037.0490.03.00.0
04497.00.00.03.0
052.0163.0327.08.0
062.0397.0101.00.0
070.01.01.0498.0
084.03.0492.01.0
093.0374.075.048.0
10253.080.028.0139.0
1163.0116.0205.0116.0
PWM
ACGT
01-0.1170.6750.008-1.975
020.6910.256-0.38-3.573
03-2.6941.357-3.325-4.4
041.371-4.4-4.4-3.325
05-3.5730.2630.954-2.584
06-3.5731.147-0.21-4.4
07-4.4-3.903-3.9031.373
08-3.126-3.3251.361-3.903
09-3.3251.088-0.503-0.938
100.699-0.439-1.4540.105
11-0.673-0.0740.49-0.074